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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
82
target gene predictions
36
candidate regulatory elements
35
accessible chromatin
26
gene expression
24
chromatin state
17
binding sites
16
histone modifications
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
80
February, 2024
67
September, 2022
45
February, 2021
10
August, 2021
10
March, 2020
7
June, 2020
7
November, 2021
5
May, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
March, 2024
2
May, 2022
2
October, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
192
bed bed3+
32
bigWig
30
tsv
21
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
257
Homo sapiens
Biosample type
93
cell line
89
tissue
68
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
250
AMP
7
ENCODE
Genome assembly (visualization)
222
hg19
129
GRCh38
2
hg18
BIOSAMPLE
TYPE
257 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
gene expression
chromatin state
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
HeLa-S3
55
5
3
1
HepG2
3
2
2
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
+ See 1 more…
tissue
liver
10
13
4
1
9
1
2
7
1
1
right lobe of liver
1
2
1
1
1
3
uterus
2
3
1
1
1
1
femur
1
2
1
arm bone
1
1
1
+ See 12 more…
primary cell
hepatocyte
3
1
8
13
1
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
3
1
1
1
1
pancreatic endothelial cell
1
3
Ishikawa
1
1
1
+ See 2 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
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