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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
78
target gene predictions
33
candidate regulatory elements
22
chromatin state
21
accessible chromatin
12
histone modifications
10
binding sites
9
eQTL
5
gene expression
3
Fine-mapped variants
1
caQTL
1
differential activity
1
variant allelic effects
Date released
61
September, 2022
52
February, 2024
39
February, 2021
7
August, 2021
6
June, 2020
6
March, 2020
4
May, 2021
3
August, 2017
3
November, 2021
2
February, 2020
2
January, 2020
2
January, 2022
2
March, 2024
2
May, 2022
2
October, 2022
1
May, 2020
1
November, 2019
1
September, 2018
Available data
157
bed bed3+
19
bed bed9
14
bigWig
10
tsv
1
bam
1
bigBed bed9
Organism
196
Homo sapiens
Biosample type
93
cell line
89
tissue
14
primary cell
Organ
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
193
AMP
3
ENCODE
Genome assembly (visualization)
185
hg19
95
GRCh38
2
hg18
organ_slims!
epithelium
BIOSAMPLE
TYPE
196 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
Fine-mapped variants
caQTL
differential activity
variant allelic effects
cell line
HeLa-S3
55
5
3
1
HepG2
3
2
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
+ See 1 more…
tissue
liver
10
13
9
4
2
1
7
1
1
1
right lobe of liver
1
2
1
1
1
3
uterus
2
3
1
1
1
1
femur
1
2
1
arm bone
1
1
1
+ See 12 more…
primary cell
hepatic stellate cell
1
1
1
3
1
1
1
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
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