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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
84
candidate regulatory elements
80
target gene predictions
50
chromatin state
50
gene expression
31
binding sites
25
histone modifications
20
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
caQTL
2
pQTL
Date released
126
September, 2022
111
February, 2021
50
November, 2021
20
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
11
August, 2021
11
October, 2022
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
Available data
334
bed bed3+
64
tsv
55
bigWig
43
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
466
Homo sapiens
Biosample type
279
primary cell
105
tissue
50
in vitro differentiated cells
31
cell line
1
stem cell
Organ
947
epithelium
652
kidney
466
brain
456
connective tissue
373
musculature of body
311
lung
289
intestine
277
pancreas
263
vasculature
253
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
392
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
394
hg19
124
GRCh38
2
hg18
annotation_type!
caQTL
BIOSAMPLE
TYPE
466 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 43 more…
tissue
adipose tissue
2
7
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
vagina
4
2
2
1
1
subcutaneous abdominal adipose tissue
5
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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