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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
101
accessible chromatin
75
target gene predictions
74
candidate regulatory elements
50
chromatin state
26
binding sites
24
variant allelic effects
14
histone modifications
13
eQTL
12
Fine-mapped variants
1
sQTL
Date released
119
September, 2022
70
February, 2021
34
February, 2024
24
November, 2021
20
January, 2021
19
March, 2020
19
May, 2020
18
May, 2021
17
January, 2020
10
June, 2020
8
August, 2021
8
October, 2019
5
November, 2019
4
August, 2017
4
February, 2020
4
October, 2022
3
April, 2020
1
April, 2019
1
February, 2023
1
June, 2021
1
May, 2019
Available data
319
bed bed3+
84
bigWig
45
bed bed9
16
tsv
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
390
Homo sapiens
Biosample type
190
primary cell
165
tissue
33
cell line
2
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
343
AMP
24
ENCODE
20
T1D
3
LungMap
Genome assembly (visualization)
390
hg19
148
GRCh38
BIOSAMPLE
TYPE
390 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
sQTL
primary cell
endothelial cell of umbilical vein
2
4
6
5
2
pancreatic ductal cell
6
3
1
1
2
endothelial cell of hepatic sinusoid
6
6
pancreatic beta cell
8
3
1
pancreatic alpha cell
7
3
1
+ See 30 more…
tissue
islet of Langerhans
6
1
3
2
1
1
9
1
body of pancreas
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
coronary artery
3
3
3
3
2
1
3
tibial artery
3
2
3
3
2
1
3
+ See 12 more…
cell line
EndoC_BH1
8
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 5 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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