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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
122
candidate regulatory elements
108
accessible chromatin
98
target gene predictions
84
gene expression
73
chromatin state
45
binding sites
32
differential activity
28
histone modifications
27
eQTL
27
variant allelic effects
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
183
September, 2022
143
February, 2021
56
November, 2021
50
September, 2023
34
February, 2024
22
January, 2020
22
June, 2020
21
March, 2020
21
May, 2020
14
February, 2020
14
October, 2022
13
May, 2021
12
August, 2021
11
March, 2023
9
January, 2022
6
April, 2020
4
August, 2017
4
February, 2023
3
May, 2022
3
November, 2019
3
November, 2020
3
October, 2019
2
January, 2021
2
March, 2024
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
1
November, 2022
Available data
437
bed bed3+
128
tsv
81
bigWig
69
bed bed9
10
bigBed bed9
9
txt
1
bigBed narrowPeak
Organism
665
Homo sapiens
Biosample type
433
primary cell
189
tissue
in vitro differentiated cells
42
cell line
1
stem cell
Organ
923
epithelium
651
kidney
462
brain
410
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
545
AMP
56
ENCODE
50
KPMP
6
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
532
hg19
201
GRCh38
2
hg18
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
665 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
differential activity
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
2
4
5
2
1
osteoblast
2
5
2
2
1
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 72 more…
tissue
adipose tissue
7
2
8
3
6
1
4
1
coronary artery
3
3
3
1
3
2
2
3
1
subcutaneous adipose tissue
2
2
5
1
1
6
1
3
tibial artery
3
3
2
1
3
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 18 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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