Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
30
accessible chromatin
29
target gene predictions
28
gene expression
25
chromatin state
21
candidate regulatory elements
17
differential activity
12
binding sites
10
variant allelic effects
2
caQTL
1
histone modifications
Date released
66
September, 2022
February, 2021
35
September, 2023
17
February, 2024
12
November, 2021
9
January, 2020
8
May, 2020
6
October, 2022
5
June, 2020
4
March, 2023
3
April, 2020
3
May, 2021
2
August, 2017
2
February, 2020
2
February, 2023
1
March, 2020
Available data
105
bed bed3+
43
tsv
25
bigWig
23
bed bed9
2
bigBed bed9
Organism
175
Homo sapiens
Biosample type
175
primary cell
74
tissue
25
cell line
2
in vitro differentiated cells
Organ
655
epithelium
227
connective tissue
216
kidney
141
vasculature
119
pancreas
94
blood vessel
72
skin of body
56
liver
41
musculature of body
34
mammary gland
32
extraembryonic component
30
brain
29
lung
25
heart
22
intestine
22
penis
21
artery
18
eye
17
embryo
15
lymphatic vessel
15
vein
11
adrenal gland
11
bronchus
11
stomach
9
esophagus
8
bone element
8
bone marrow
8
prostate gland
7
placenta
6
large intestine
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
3
uterus
2
ovary
1
adipose tissue
1
blood
1
bodily fluid
1
limb
1
pericardium
1
testis
1
thymus
1
trachea
Project
125
AMP
35
KPMP
12
ENCODE
3
LungMap
Genome assembly (visualization)
126
hg19
60
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
175 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
candidate regulatory elements
differential activity
binding sites
variant allelic effects
caQTL
histone modifications
primary cell
endothelial cell of hepatic sinusoid
6
4
6
endothelial cell of umbilical vein
2
4
5
2
1
1
mammary gland epithelial cell
1
4
3
3
1
luminal epithelial cell of mammary gland
2
3
1
1
choroid plexus epithelial cell
1
1
1
1
1
1
+ See 30 more…
See all biosamples
Download