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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
126
candidate regulatory elements
107
target gene predictions
95
accessible chromatin
85
gene expression
79
chromatin state
49
binding sites
32
differential activity
32
histone modifications
29
variant allelic effects
25
eQTL
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
189
September, 2022
154
February, 2021
56
November, 2021
52
September, 2023
35
February, 2024
June, 2020
23
January, 2020
23
May, 2020
21
March, 2020
19
May, 2021
14
February, 2020
14
October, 2022
12
August, 2021
11
March, 2023
9
January, 2022
8
August, 2017
7
November, 2022
6
April, 2020
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
451
bed bed3+
127
tsv
83
bigWig
71
bed bed9
10
bigBed bed9
9
txt
1
bigBed narrowPeak
Organism
680
Homo sapiens
Biosample type
418
primary cell
178
tissue
48
in vitro differentiated cells
35
cell line
1
stem cell
Organ
924
epithelium
637
kidney
445
brain
438
connective tissue
369
musculature of body
305
lung
279
intestine
273
pancreas
260
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
562
AMP
56
ENCODE
50
KPMP
6
LungMap
4
ITG
2
T1D
Genome assembly (visualization)
548
hg19
203
GRCh38
2
hg18
month_released!
June, 2020
BIOSAMPLE
TYPE
680 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
gene expression
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
2
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
4
1
5
2
1
endothelial cell of hepatic sinusoid
6
4
6
fibroblast of lung
6
4
4
2
+ See 70 more…
tissue
adipose tissue
7
8
2
3
6
1
1
4
coronary artery
3
3
3
1
3
2
2
3
1
subcutaneous adipose tissue
2
2
5
1
1
1
6
3
omental fat pad
5
2
2
2
2
2
3
tibial artery
3
2
2
1
3
2
2
3
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
3
1
6
1
1
mesenchymal stem cell
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
fibroblast of cardiac tissue
1
2
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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