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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
264
gene expression
226
accessible chromatin
135
target gene predictions
124
candidate regulatory elements
97
differential activity
72
chromatin state
52
variant allelic effects
48
binding sites
31
histone modifications
9
eQTL
5
caQTL
Date released
218
February, 2021
190
September, 2022
165
September, 2023
127
November, 2021
79
February, 2024
38
March, 2023
36
May, 2021
27
June, 2020
25
January, 2020
25
May, 2020
24
August, 2021
20
January, 2021
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
8
October, 2022
7
April, 2020
7
October, 2019
6
August, 2018
4
November, 2019
3
August, 2017
3
January, 2022
3
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
620
bed bed3+
346
tsv
189
bigWig
80
txt
69
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1063
Homo sapiens
Biosample type
857
primary cell
134
tissue
46
cell line
26
in vitro differentiated cells
Organ
943
epithelium
649
kidney
449
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
742
AMP
165
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
692
hg19
274
GRCh38
month_released!
March, 2020
BIOSAMPLE
TYPE
1063 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
9
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
3
6
5
1
2
+ See 156 more…
tissue
pigmented layer of retina
20
coronary artery
1
3
3
3
3
2
2
1
tibial artery
1
3
2
3
3
2
2
ascending aorta
1
1
2
4
3
1
1
aorta
1
2
4
4
+ See 24 more…
cell line
EndoC_BH1
8
8
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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