Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
30
gene expression
28
candidate regulatory elements
21
accessible chromatin
17
differential activity
16
target gene predictions
15
chromatin state
13
binding sites
7
variant allelic effects
2
histone modifications
1
caQTL
Date released
39
September, 2022
35
September, 2023
24
February, 2021
16
February, 2024
6
January, 2020
6
May, 2020
6
November, 2021
4
March, 2023
3
April, 2020
2
February, 2020
2
June, 2020
2
May, 2021
2
October, 2022
1
August, 2017
1
February, 2023
1
March, 2020
Available data
87
bed bed3+
45
tsv
19
bigWig
14
bed bed9
2
bigBed bed9
2
txt
Organism
150
Homo sapiens
Biosample type
150
primary cell
84
tissue
11
cell line
2
in vitro differentiated cells
Organ
819
epithelium
309
kidney
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
106
AMP
35
KPMP
6
ENCODE
3
LungMap
Genome assembly (visualization)
100
hg19
41
GRCh38
organ_slims!
connective tissue
BIOSAMPLE
TYPE
150 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
differential activity
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
caQTL
primary cell
endothelial cell of umbilical vein
6
2
4
5
2
1
endothelial cell of hepatic sinusoid
4
6
6
dermis blood vessel endothelial cell
6
2
2
choroid plexus epithelial cell
2
1
1
1
1
1
pulmonary artery endothelial cell
2
1
1
1
1
1
+ See 23 more…
See all biosamples
Download