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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
125
candidate regulatory elements
119
accessible chromatin
106
target gene predictions
84
gene expression
77
chromatin state
50
binding sites
32
differential activity
32
histone modifications
28
variant allelic effects
25
eQTL
12
Fine-mapped variants
4
caQTL
2
pQTL
Date released
186
September, 2022
155
February, 2021
58
November, 2021
52
September, 2023
36
February, 2024
24
June, 2020
21
January, 2020
20
May, 2020
18
March, 2020
18
May, 2021
14
October, 2022
13
February, 2020
12
August, 2021
11
March, 2023
8
August, 2017
8
January, 2022
7
April, 2020
7
November, 2022
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
November, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
473
bed bed3+
124
tsv
83
bigWig
69
bed bed9
9
bigBed bed9
9
txt
1
bigBed narrowPeak
Organism
696
Homo sapiens
Biosample type
448
primary cell
160
tissue
52
in vitro differentiated cells
35
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
573
AMP
58
ENCODE
50
KPMP
7
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
564
hg19
196
GRCh38
2
hg18
organ_slims!
limb
BIOSAMPLE
TYPE
696 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
2
4
5
2
1
osteoblast
2
5
2
2
1
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 74 more…
tissue
adipose tissue
7
2
8
3
6
1
1
4
coronary artery
3
3
3
1
3
2
2
3
1
subcutaneous adipose tissue
2
2
5
1
1
1
6
3
omental fat pad
5
2
2
2
2
2
3
ascending aorta
4
1
2
1
3
1
1
3
+ See 14 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
dermis microvascular lymphatic vessel endothelial cell
1
1
fibroblast
1
1
+ See 9 more…
cell line
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
foreskin fibroblast
1
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
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