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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
281
gene expression
233
accessible chromatin
152
target gene predictions
143
candidate regulatory elements
99
differential activity
82
chromatin state
55
variant allelic effects
50
binding sites
32
histone modifications
22
eQTL
15
Fine-mapped variants
5
caQTL
Date released
241
February, 2021
214
September, 2022
165
September, 2023
127
November, 2021
81
February, 2024
39
May, 2021
38
March, 2023
30
August, 2021
29
January, 2020
28
June, 2020
28
May, 2020
25
March, 2020
20
January, 2021
18
February, 2020
16
February, 2023
16
November, 2022
8
October, 2022
7
April, 2020
7
October, 2019
6
August, 2018
6
January, 2022
5
August, 2017
4
November, 2019
3
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
May, 2019
Available data
673
bed bed3+
377
tsv
194
bigWig
80
txt
77
bed bed9
14
bigBed narrowPeak
9
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1169
Homo sapiens
Biosample type
863
primary cell
229
tissue
50
cell line
27
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
848
AMP
165
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
774
hg19
306
GRCh38
2
hg18
BIOSAMPLE
TYPE
1169 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
+ See 157 more…
tissue
adipose tissue
3
2
8
7
6
1
1
4
coronary artery
1
3
3
3
3
2
2
3
1
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
tibial artery
1
3
2
3
3
2
2
3
+ See 32 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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