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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
gene expression
241
accessible chromatin
155
target gene predictions
149
candidate regulatory elements
97
differential activity
87
chromatin state
56
binding sites
52
variant allelic effects
37
histone modifications
9
Fine-mapped variants
9
eQTL
5
caQTL
Date released
254
February, 2021
232
September, 2022
165
September, 2023
128
November, 2021
79
February, 2024
38
March, 2023
36
May, 2021
32
June, 2020
26
May, 2020
25
January, 2020
24
August, 2021
22
January, 2021
17
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
9
October, 2022
7
April, 2020
7
October, 2019
6
August, 2018
4
November, 2019
3
August, 2017
3
January, 2022
3
March, 2024
3
May, 2022
1
July, 2020
1
May, 2019
Available data
694
bed bed3+
359
tsv
199
bigWig
83
bed bed9
80
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
1
bed bed9+
Organism
1169
Homo sapiens
Biosample type
876
primary cell
167
tissue
100
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
845
AMP
165
KPMP
128
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
790
hg19
306
GRCh38
BIOSAMPLE
TYPE
1169 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 162 more…
tissue
coronary artery
1
3
3
3
3
2
3
2
1
pigmented layer of retina
20
tibial artery
1
3
2
3
3
2
3
2
ascending aorta
1
1
2
4
3
1
3
1
aorta
1
4
4
4
+ See 36 more…
cell line
EndoC_BH1
8
8
1
3
1
MG63
1
1
2
1
1
1
OCI-LY1
1
2
1
1
1
SJSA1
1
1
2
1
1
L1-S8
1
1
2
1
+ See 18 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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