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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
137
candidate regulatory elements
105
accessible chromatin
84
target gene predictions
78
chromatin state
39
gene expression
33
binding sites
18
differential activity
17
histone modifications
17
variant allelic effects
9
Fine-mapped variants
9
eQTL
3
caQTL
Date released
200
September, 2022
112
February, 2021
35
September, 2023
28
February, 2023
22
November, 2022
21
February, 2024
19
June, 2020
18
January, 2020
17
May, 2020
16
November, 2021
13
March, 2020
8
May, 2021
7
February, 2020
7
October, 2022
5
January, 2022
4
August, 2017
4
March, 2023
3
April, 2020
3
March, 2024
3
November, 2019
2
October, 2019
1
August, 2021
1
May, 2019
Available data
398
bed bed3+
74
bed bed9
70
bigWig
68
tsv
8
bigBed bed9
2
txt
Organism
549
Homo sapiens
Biosample type
288
tissue
198
primary cell
55
cell line
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
495
AMP
35
KPMP
16
ENCODE
3
LungMap
Genome assembly (visualization)
481
hg19
146
GRCh38
BIOSAMPLE
TYPE
549 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
differential activity
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
tissue
large intestine
27
1
14
13
1
retina
6
23
3
3
1
1
1
1
1
sigmoid colon
10
1
7
5
coronary artery
3
3
3
3
1
2
3
2
1
pigmented layer of retina
20
+ See 20 more…
primary cell
endothelial cell of umbilical vein
6
2
4
5
2
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
retinal pigment epithelial cell
2
3
1
1
2
1
fibroblast of pulmonary artery
2
1
1
1
2
1
+ See 34 more…
cell line
HT-29
2
1
2
1
1
1
WERI-Rb-1
2
1
1
1
2
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
dermis microvascular lymphatic vessel endothelial cell
1
1
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