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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
73
candidate regulatory elements
52
target gene predictions
49
chromatin state
46
gene expression
28
binding sites
22
histone modifications
19
differential activity
19
variant allelic effects
16
accessible chromatin
14
eQTL
12
Fine-mapped variants
4
caQTL
Date released
119
September, 2022
73
February, 2021
35
September, 2023
22
March, 2020
18
February, 2024
17
May, 2020
11
August, 2021
11
June, 2020
7
February, 2020
7
January, 2020
6
May, 2021
5
October, 2022
4
August, 2017
4
January, 2022
4
March, 2023
3
February, 2023
2
May, 2022
2
November, 2021
2
October, 2019
1
July, 2020
1
March, 2024
Available data
252
bed bed3+
84
tsv
bigWig
46
bed bed9
9
bigBed bed9
3
csv
2
txt
1
bam
Organism
354
Homo sapiens
Biosample type
176
primary cell
132
tissue
37
cell line
9
in vitro differentiated cells
Organ
773
epithelium
616
kidney
445
brain
403
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
133
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
317
AMP
35
KPMP
2
ENCODE
Genome assembly (visualization)
277
hg19
88
GRCh38
2
hg18
files.file_type!
bigWig
BIOSAMPLE
TYPE
354 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
differential activity
variant allelic effects
accessible chromatin
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
3
1
8
1
4
2
1
endothelial cell of umbilical vein
6
4
5
2
1
1
dermis blood vessel endothelial cell
6
2
2
endothelial cell of hepatic sinusoid
6
4
fibroblast of pulmonary artery
2
1
1
2
1
1
+ See 28 more…
tissue
liver
13
10
9
1
1
2
1
2
7
1
coronary artery
3
3
2
1
2
2
3
1
tibial artery
3
2
3
1
2
1
2
3
ascending aorta
4
2
3
1
1
1
3
aorta
4
4
4
1
+ See 6 more…
cell line
HepG2
2
3
2
3
5
1
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
choroid plexus epithelial cell
1
1
1
smooth muscle cell of the coronary artery
1
1
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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