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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
63
candidate regulatory elements
47
gene expression
44
target gene predictions
43
accessible chromatin
42
chromatin state
22
binding sites
17
differential activity
17
histone modifications
15
variant allelic effects
9
eQTL
6
Fine-mapped variants
2
caQTL
Date released
100
September, 2022
60
February, 2021
32
February, 2024
30
September, 2023
16
March, 2020
15
January, 2020
13
May, 2020
11
August, 2021
9
November, 2021
8
June, 2020
4
August, 2017
4
March, 2023
4
May, 2021
4
October, 2022
3
April, 2020
3
February, 2020
2
May, 2022
2
November, 2019
2
October, 2019
1
February, 2023
1
January, 2022
1
July, 2020
1
March, 2024
1
September, 2018
Available data
206
bed bed3+
68
tsv
39
bigWig
38
bed bed9
7
bigBed bed9
3
csv
2
txt
1
bam
Organism
327
Homo sapiens
Biosample type
183
primary cell
100
tissue
35
cell line
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
285
AMP
30
KPMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
256
hg19
103
GRCh38
2
hg18
organ_slims!
artery
BIOSAMPLE
TYPE
327 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
13
3
8
1
1
4
2
endothelial cell of umbilical vein
6
4
2
5
2
1
endothelial cell of hepatic sinusoid
4
6
6
dermis blood vessel endothelial cell
6
2
2
hepatic stellate cell
1
1
1
3
1
1
1
+ See 24 more…
tissue
liver
13
1
10
4
9
1
1
2
7
1
ascending aorta
4
1
2
1
3
1
1
3
aorta
4
1
4
4
thoracic aorta
4
2
1
3
1
right lobe of liver
2
1
1
1
1
3
+ See 2 more…
cell line
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
choroid plexus epithelial cell
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 2 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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