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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
265
gene expression
230
accessible chromatin
147
candidate regulatory elements
147
target gene predictions
97
differential activity
83
chromatin state
55
binding sites
52
variant allelic effects
37
histone modifications
10
eQTL
5
caQTL
Date released
243
February, 2021
223
September, 2022
165
September, 2023
127
November, 2021
79
February, 2024
38
March, 2023
37
May, 2021
31
June, 2020
25
January, 2020
25
May, 2020
24
August, 2021
20
January, 2021
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
8
October, 2022
7
April, 2020
7
October, 2019
6
August, 2018
4
January, 2022
4
March, 2024
4
November, 2019
3
August, 2017
2
May, 2022
1
July, 2020
1
May, 2019
Available data
672
bed bed3+
347
tsv
189
bigWig
80
bed bed9
80
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1128
Homo sapiens
Biosample type
857
primary cell
149
tissue
96
cell line
26
in vitro differentiated cells
Organ
943
epithelium
649
kidney
451
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
807
AMP
165
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
755
hg19
286
GRCh38
month_released!
March, 2020
BIOSAMPLE
TYPE
1128 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
9
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
3
5
2
1
+ See 156 more…
tissue
pigmented layer of retina
20
coronary artery
1
3
3
3
3
2
2
1
tibial artery
1
3
3
2
3
2
2
prostate gland
1
4
2
2
2
2
1
ascending aorta
1
1
4
2
3
1
1
+ See 26 more…
cell line
EndoC_BH1
8
8
3
1
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
1
2
1
1
1
1
RWPE1
1
2
1
1
1
1
+ See 16 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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