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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
180
candidate regulatory elements
135
accessible chromatin
110
target gene predictions
100
chromatin state
63
binding sites
57
gene expression
43
histone modifications
32
variant allelic effects
25
eQTL
15
Fine-mapped variants
12
differential activity
4
caQTL
Date released
252
September, 2022
199
February, 2021
37
February, 2024
35
June, 2020
29
November, 2022
28
February, 2023
25
January, 2020
25
May, 2020
21
March, 2020
21
May, 2021
16
February, 2020
16
October, 2022
11
March, 2023
11
May, 2024
10
January, 2022
8
August, 2017
8
August, 2021
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
March, 2024
2
September, 2018
2
September, 2023
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
575
bed bed3+
92
bed bed9
80
tsv
71
bigWig
10
bigBed bed9
9
txt
1
bigBed narrowPeak
Organism
776
Homo sapiens
Biosample type
353
primary cell
260
tissue
104
cell line
58
in vitro differentiated cells
1
stem cell
Organ
648
epithelium
509
kidney
466
brain
392
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
237
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
776
AMP
60
ENCODE
50
KPMP
6
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
690
hg19
183
GRCh38
2
hg18
BIOSAMPLE
TYPE
776 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
gene expression
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
differential activity
caQTL
primary cell
endothelial cell of umbilical vein
6
2
4
5
2
1
osteoblast
2
5
2
1
3
2
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
1
2
1
4
2
endothelial cell of hepatic sinusoid
4
6
4
+ See 61 more…
tissue
retina
6
23
3
3
1
1
1
1
1
adipose tissue
7
2
8
6
1
3
1
4
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
1
6
3
1
pigmented layer of retina
20
+ See 21 more…
cell line
22Rv1
4
2
2
1
1
WERI-Rb-1
2
1
1
1
2
1
GM23248
2
1
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
+ See 23 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
3
1
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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