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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
103
accessible chromatin
85
gene expression
82
candidate regulatory elements
81
target gene predictions
54
chromatin state
51
differential activity
27
variant allelic effects
26
binding sites
22
eQTL
14
Fine-mapped variants
14
histone modifications
3
caQTL
2
sQTL
2
variant to gene
Date released
131
September, 2022
84
February, 2021
51
March, 2023
43
February, 2024
37
May, 2021
35
September, 2023
26
November, 2021
21
March, 2020
21
May, 2020
20
January, 2020
20
January, 2021
11
June, 2020
9
August, 2021
8
January, 2022
8
October, 2019
7
August, 2018
7
February, 2020
5
February, 2023
5
November, 2019
4
August, 2017
4
October, 2022
3
April, 2020
2
March, 2024
1
April, 2019
1
January, 2018
1
June, 2021
1
May, 2019
Available data
339
bed bed3+
141
tsv
89
bigWig
49
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
txt
Organism
566
Homo sapiens
Biosample type
298
primary cell
218
tissue
45
cell line
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
480
AMP
35
KPMP
26
ENCODE
20
T1D
3
LungMap
2
community
Genome assembly (visualization)
411
hg19
155
GRCh38
BIOSAMPLE
TYPE
566 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
eQTL
Fine-mapped variants
histone modifications
caQTL
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
2
6
4
5
1
2
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 45 more…
tissue
islet of Langerhans
6
11
1
3
1
2
13
2
1
2
2
body of pancreas
2
8
5
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
1
3
3
3
2
2
3
1
thyroid gland
1
8
5
4
1
+ See 17 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 5 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
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