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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
29
candidate regulatory elements
25
gene expression
24
target gene predictions
22
accessible chromatin
22
chromatin state
16
binding sites
15
histone modifications
8
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
52
September, 2022
33
February, 2021
29
February, 2024
11
March, 2020
10
August, 2021
6
June, 2020
5
January, 2020
5
May, 2020
4
August, 2017
4
March, 2023
4
May, 2021
2
February, 2020
2
May, 2022
2
October, 2022
1
January, 2022
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
113
bed bed3+
29
tsv
20
bigWig
18
bed bed9
3
bigBed bed9
3
csv
1
bam
Organism
174
Homo sapiens
Biosample type
78
primary cell
59
tissue
30
cell line
7
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
174
AMP
5
ENCODE
Genome assembly (visualization)
140
hg19
60
GRCh38
2
hg18
BIOSAMPLE
TYPE
174 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
13
2
7
1
1
4
2
endothelial cell of umbilical vein
6
4
2
5
2
1
endothelial cell of hepatic sinusoid
4
4
6
hepatic stellate cell
1
1
1
2
1
1
1
pancreatic endothelial cell
1
3
+ See 1 more…
tissue
liver
13
1
10
4
9
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
whole blood
1
cell line
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
vein endothelial cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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