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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
75
candidate regulatory elements
48
target gene predictions
accessible chromatin
9
binding sites
6
histone modifications
4
chromatin state
3
gene expression
2
eQTL
1
variant allelic effects
Date released
69
September, 2022
53
February, 2021
6
May, 2021
4
August, 2017
3
February, 2024
3
March, 2024
3
November, 2021
2
January, 2022
2
March, 2020
2
October, 2022
1
May, 2020
Available data
142
bed bed3+
bed bed9
3
tsv
2
bigBed bed9
Organism
148
Homo sapiens
Biosample type
103
tissue
28
cell line
17
primary cell
Organ
687
epithelium
525
kidney
358
brain
331
connective tissue
277
musculature of body
226
lung
213
intestine
199
pancreas
198
vasculature
183
heart
181
bodily fluid
176
embryo
174
limb
172
blood
157
skin of body
151
blood vessel
131
large intestine
118
liver
104
extraembryonic component
88
stomach
76
uterus
74
adipose tissue
66
mammary gland
62
small intestine
60
bone element
60
prostate gland
56
artery
53
placenta
52
adrenal gland
51
penis
47
ureter
46
lymph node
41
eye
37
gonad
36
thymus
34
esophagus
33
spinal cord
26
spleen
20
testis
18
nerve
17
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
lymphatic vessel
14
mouth
13
pituitary gland
11
bronchus
10
bone marrow
10
breast
8
vagina
7
skeleton
7
tongue
7
urinary bladder
4
trachea
2
nose
1
pericardium
Project
145
AMP
3
ENCODE
Genome assembly (visualization)
142
hg19
7
GRCh38
files.file_type!
bed bed9
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
148 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
chromatin state
gene expression
eQTL
variant allelic effects
tissue
large intestine
27
14
1
sigmoid colon
10
7
transverse colon
8
5
1
colonic mucosa
4
2
1
1
mucosa of rectum
4
2
1
+ See 8 more…
cell line
HT-29
2
2
1
1
HCT116
2
3
SW480
2
1
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 4 more…
primary cell
endothelial cell of umbilical vein
6
4
2
1
1
colon epithelial cell
3
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