Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
150
candidate regulatory elements
127
target gene predictions
112
accessible chromatin
101
chromatin state
68
gene expression
38
binding sites
30
histone modifications
27
variant allelic effects
25
eQTL
15
Fine-mapped variants
14
differential activity
4
caQTL
2
pQTL
Date released
225
September, 2022
158
February, 2021
57
November, 2021
25
March, 2020
24
January, 2020
24
June, 2020
23
February, 2024
23
May, 2020
20
May, 2021
19
August, 2021
18
February, 2020
17
September, 2023
13
October, 2022
9
January, 2022
8
August, 2017
7
March, 2023
7
November, 2022
6
April, 2019
4
February, 2023
4
October, 2019
3
April, 2020
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
503
bed bed3+
92
tsv
88
bed bed9
76
bigWig
14
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
713
Homo sapiens
Biosample type
315
primary cell
310
tissue
50
in vitro differentiated cells
37
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
632
AMP
57
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
617
hg19
214
GRCh38
2
hg18
BIOSAMPLE
TYPE
713 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
differential activity
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
2
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
4
2
5
2
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
+ See 50 more…
tissue
heart
37
20
5
21
3
1
1
2
heart left ventricle
11
7
3
8
1
1
2
1
adipose tissue
7
8
2
6
3
1
1
4
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
1
6
3
1
+ See 21 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download