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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
57
target gene predictions
49
chromatin state
14
accessible chromatin
11
binding sites
6
histone modifications
4
eQTL
4
gene expression
3
Fine-mapped variants
1
variant allelic effects
Date released
86
September, 2022
14
February, 2021
10
June, 2020
7
May, 2021
6
November, 2021
5
March, 2020
4
August, 2017
3
January, 2020
3
January, 2022
3
March, 2024
3
October, 2022
2
February, 2024
2
May, 2020
1
February, 2020
Available data
92
bed bed3+
45
bed bed9
8
tsv
4
bigWig
2
bigBed bed9
Organism
149
Homo sapiens
Biosample type
98
tissue
29
cell line
22
primary cell
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
143
AMP
6
ENCODE
Genome assembly (visualization)
141
hg19
61
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
149 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
Fine-mapped variants
variant allelic effects
tissue
large intestine
14
13
1
1
spinal cord
8
7
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
colonic mucosa
2
3
1
+ See 9 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 3 more…
primary cell
endothelial cell of umbilical vein
4
5
2
2
1
colon epithelial cell
3
3
astrocyte of the spinal cord
1
1
See all biosamples
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