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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
50
candidate regulatory elements
34
accessible chromatin
34
target gene predictions
30
chromatin state
28
binding sites
25
gene expression
19
histone modifications
8
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
76
September, 2022
60
February, 2021
29
February, 2024
14
June, 2020
11
March, 2020
10
August, 2021
5
January, 2020
5
May, 2020
5
May, 2021
5
November, 2021
4
August, 2017
4
March, 2023
4
October, 2022
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
March, 2024
1
November, 2019
1
September, 2018
Available data
172
bed bed3+
29
tsv
26
bed bed9
24
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
241
Homo sapiens
Biosample type
92
cell line
83
primary cell
59
tissue
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
236
AMP
5
ENCODE
Genome assembly (visualization)
207
hg19
73
GRCh38
2
hg18
BIOSAMPLE
TYPE
241 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
cell line
HepG2
2
2
3
2
3
5
GM12864
2
1
1
1
2
1
GM12865
2
1
1
1
2
1
MM.1S
2
1
2
1
1
1
GM10248
2
1
1
1
1
+ See 15 more…
primary cell
hepatocyte
1
8
3
1
1
13
4
2
endothelial cell of umbilical vein
6
2
4
5
2
1
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
1
3
1
1
1
1
1
pancreatic endothelial cell
1
3
+ See 1 more…
tissue
liver
13
4
10
9
1
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
whole blood
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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