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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
67
accessible chromatin
49
gene expression
target gene predictions
33
differential activity
30
candidate regulatory elements
22
chromatin state
15
eQTL
12
variant allelic effects
8
binding sites
7
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
47
March, 2023
36
February, 2021
34
September, 2022
26
May, 2021
25
February, 2024
11
November, 2021
10
January, 2021
8
August, 2021
8
May, 2020
7
August, 2018
6
March, 2020
6
October, 2019
5
January, 2020
5
June, 2020
4
August, 2017
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
October, 2022
Available data
128
bed bed3+
77
tsv
55
bigWig
17
bed bed9
11
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
252
Homo sapiens
Biosample type
118
primary cell
100
tissue
31
cell line
3
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
229
AMP
11
ENCODE
10
T1D
2
community
Genome assembly (visualization)
159
hg19
59
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
252 results
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Clear Filters
accessible chromatin
gene expression
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
2
6
5
1
2
pancreatic ductal cell
6
3
3
1
1
2
pancreatic beta cell
8
3
3
1
pancreatic alpha cell
7
3
3
1
pancreatic acinar cell
6
3
3
1
+ See 11 more…
tissue
islet of Langerhans
6
11
3
13
1
2
1
2
2
2
body of pancreas
2
8
4
1
1
3
pancreas
5
5
3
1
1
1
1
endocrine pancreas
7
4
pancreatic ductal cell
2
+ See 7 more…
cell line
EndoC_BH1
8
8
3
1
Panc1
2
1
8988T
1
1
HPDE6-E6E7
1
1
vein endothelial cell
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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