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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
44
candidate regulatory elements
33
target gene predictions
28
accessible chromatin
28
chromatin state
26
gene expression
17
binding sites
15
histone modifications
9
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
70
September, 2022
43
February, 2021
29
February, 2024
12
March, 2020
10
August, 2021
7
June, 2020
5
January, 2020
5
May, 2020
5
May, 2021
5
November, 2021
4
August, 2017
4
March, 2023
2
February, 2020
2
January, 2022
2
March, 2024
2
May, 2022
2
November, 2019
2
October, 2022
1
July, 2020
1
September, 2018
Available data
144
bed bed3+
30
tsv
25
bigWig
24
bed bed9
3
bigBed bed9
3
csv
1
bam
Organism
213
Homo sapiens
Biosample type
93
tissue
83
primary cell
30
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
208
AMP
5
ENCODE
Genome assembly (visualization)
177
hg19
73
GRCh38
2
hg18
BIOSAMPLE
TYPE
213 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
liver
13
10
4
9
1
1
2
7
1
1
spleen
15
8
2
6
1
1
1
right lobe of liver
2
1
1
1
1
3
whole blood
1
primary cell
hepatocyte
1
3
8
1
13
1
4
2
endothelial cell of umbilical vein
6
4
2
5
2
1
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
3
1
1
1
1
pancreatic endothelial cell
1
3
+ See 1 more…
cell line
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
vein endothelial cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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