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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
24
gene expression
candidate regulatory elements
21
target gene predictions
17
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
32
September, 2022
29
February, 2024
17
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
78
bed bed3+
28
tsv
23
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
133
Homo sapiens
Biosample type
61
primary cell
43
tissue
24
cell line
5
in vitro differentiated cells
Organ
849
epithelium
493
kidney
380
connective tissue
354
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
128
AMP
5
ENCODE
Genome assembly (visualization)
101
hg19
60
GRCh38
2
hg18
annotation_type!
candidate regulatory elements
representative DNase hypersensitivity sites
BIOSAMPLE
TYPE
133 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
13
3
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
1
10
9
2
1
7
1
1
right lobe of liver
1
1
1
1
3
cell line
HepG2
2
3
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte(AFP)
3
hepatocyte
1
1
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