Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
target gene predictions
59
chromatin state
55
candidate regulatory elements
10
accessible chromatin
3
eQTL
3
gene expression
3
variant allelic effects
1
binding sites
Date released
164
September, 2022
February, 2021
10
June, 2020
6
February, 2024
6
May, 2021
4
August, 2017
3
January, 2022
3
March, 2024
2
March, 2020
1
October, 2022
Available data
138
bed bed3+
55
bed bed9
3
tsv
Organism
199
Homo sapiens
Biosample type
175
tissue
21
cell line
3
primary cell
Organ
626
epithelium
461
kidney
355
brain
301
connective tissue
272
musculature of body
232
lung
228
pancreas
211
vasculature
199
intestine
197
heart
186
limb
165
blood vessel
160
embryo
144
bodily fluid
137
blood
126
skin of body
125
liver
122
large intestine
110
extraembryonic component
88
eye
81
stomach
71
uterus
66
adipose tissue
62
small intestine
60
artery
53
mammary gland
53
placenta
52
bone element
49
adrenal gland
49
prostate gland
46
ureter
37
thymus
36
gonad
36
penis
35
lymph node
34
spinal cord
31
esophagus
24
spleen
22
nerve
19
lymphoid tissue
18
testis
17
ovary
17
thyroid gland
16
vein
15
mouth
13
lymphatic vessel
12
pituitary gland
10
breast
9
bronchus
9
skeleton
9
urinary bladder
8
tongue
8
vagina
7
bone marrow
4
nose
1
pericardium
1
trachea
Project
199
AMP
ENCODE
Genome assembly (visualization)
193
hg19
60
GRCh38
award.project!
ENCODE
month_released!
February, 2021
BIOSAMPLE
TYPE
199 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
eQTL
gene expression
variant allelic effects
binding sites
tissue
small intestine
17
15
15
1
1
large intestine
14
13
13
1
sigmoid colon
7
5
5
1
transverse colon
5
4
4
1
1
Peyer's patch
3
3
3
1
+ See 11 more…
cell line
HCT116
3
1
1
HT-29
2
1
1
1
SW480
1
1
1
1
HCT-116 cell
1
1
1
colon epithelial cell
1
1
1
+ See 1 more…
primary cell
enterocyte
3
See all biosamples
Download