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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
209
accessible chromatin
175
gene expression
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
155
September, 2023
148
September, 2022
130
February, 2021
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
August, 2021
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
547
bed bed3+
324
tsv
176
bigWig
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
868
Homo sapiens
Biosample type
738
primary cell
61
tissue
43
cell line
26
in vitro differentiated cells
Organ
868
epithelium
565
kidney
465
brain
453
connective tissue
375
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
557
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
597
hg19
234
GRCh38
files.file_type!
txt
bam
BIOSAMPLE
TYPE
868 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
6
7
2
2
1
1
2
hepatocyte
8
13
3
1
1
1
2
4
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
pancreatic ductal cell
6
3
3
3
1
1
2
+ See 133 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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