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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
136
target gene predictions
122
candidate regulatory elements
78
chromatin state
52
histone modifications
45
accessible chromatin
36
Fine-mapped variants
29
eQTL
22
binding sites
21
gene expression
17
variant allelic effects
Date released
195
September, 2022
125
February, 2021
52
February, 2024
38
March, 2020
29
January, 2020
23
June, 2020
20
May, 2020
19
January, 2022
17
February, 2020
13
May, 2021
7
October, 2022
6
August, 2017
4
May, 2019
3
March, 2024
3
September, 2023
2
January, 2021
1
May, 2022
1
November, 2019
Available data
393
bed bed3+
71
bed bed9
68
tsv
22
bigWig
6
bigBed bed9
1
bed bed9+
Organism
558
Homo sapiens
Biosample type
361
tissue
142
cell line
50
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
822
epithelium
649
kidney
465
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
556
AMP
ENCODE
2
T1D
Genome assembly (visualization)
512
hg19
208
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
558 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
16
29
18
3
2
2
1
1
1
caudate nucleus
3
5
4
1
2
3
1
1
1
substantia nigra
2
5
3
1
3
3
1
cerebellum
2
3
2
1
1
3
2
2
frontal cortex
2
2
2
2
3
2
2
1
+ See 60 more…
cell line
HeLa-S3
55
5
3
1
SK-N-DZ
2
4
2
1
1
SK-N-SH
3
4
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 11 more…
primary cell
choroid plexus epithelial cell
1
2
1
1
1
1
astrocyte of the cerebellum
1
2
1
1
1
astrocyte of the hippocampus
1
2
1
1
1
cardiac fibroblast
3
2
brain microvascular endothelial cell
1
2
1
1
+ See 10 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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