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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ChIP-seq
Assay category
81
DNA binding
Target of assay
162
histone
162
histone modification
81
broad histone mark
81
narrow histone mark
20
control
5
RNA binding protein
5
transcription factor
2
nucleotide modification
Date released
52
August, 2017
20
May, 2024
5
October, 2017
4
November, 2017
Available data
253
bed narrowPeak
253
bigWig
bam
204
bigBed narrowPeak
76
tagAlign
45
fastq
20
bed broadPeak
6
bed bed3+
Organism
81
Homo sapiens
Biosample type
81
tissue
22
primary cell
19
in vitro differentiated cells
1
cell line
Organ
20
adipose tissue
20
connective tissue
20
heart
12
liver
12
musculature of body
9
brain
8
pancreas
Project
81
AMP
Genome assembly (visualization)
20
GRCh38
12
hg19
Lab
61
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
Audit category:
1
missing controlled_by
assay_slims!
3D chromatin structure
files.file_type!
bam
BIOSAMPLE
ASSAY
81 results
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ChIP-seq
tissue
left cardiac atrium
20
subcutaneous abdominal adipose tissue
20
liver
12
skeletal muscle tissue
12
islet of Langerhans
8
brain
5
cingulate gyrus
2
layer of hippocampus
2
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