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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
Assay category
117
DNA binding
89
Transcription
14
DNA methylation
DNA accessibility
Target of assay
73
histone modification
72
histone
42
broad histone mark
30
narrow histone mark
23
transcription factor
21
control
2
RNA binding protein
Date released
537
February, 2021
220
August, 2017
173
October, 2019
159
August, 2021
143
May, 2020
120
July, 2018
115
May, 2019
80
April, 2019
74
October, 2018
69
July, 2019
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
38
March, 2020
27
May, 2022
25
February, 2020
20
November, 2019
16
November, 2017
16
November, 2018
14
February, 2023
9
April, 2020
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
4
May, 2023
4
November, 2020
3
December, 2019
1
March, 2019
1
October, 2017
Available data
174
bigWig
171
fastq
166
bam
89
tsv
62
bed narrowPeak
tagAlign
26
bed bed3+
26
bed broadPeak
18
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
220
Homo sapiens
Biosample type
220
tissue
53
in vitro differentiated cells
42
primary cell
Organ
129
pancreas
48
adipose tissue
48
connective tissue
32
liver
11
musculature of body
Project
220
AMP
Genome assembly (visualization)
150
hg19
149
GRCh38
Lab
220
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
5
inconsistent control read length
assay_slims!
DNA accessibility
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
220 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
tissue
islet of Langerhans
33
89
liver
28
3
1
subcutaneous abdominal adipose tissue
28
3
white adipose tissue
12
skeletal muscle tissue
7
4
pancreas
7
adipose tissue
2
3
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