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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
DNase-seq
8
ATAC-seq
4
total RNA-seq
1
WGBS
Assay category
66
DNA binding
8
DNA accessibility
3D chromatin structure
4
Transcription
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
65
October, 2019
7
May, 2019
6
February, 2021
February, 2020
1
July, 2019
Available data
78
bam
56
bed narrowPeak
55
bigWig
48
bigBed narrowPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
79
Homo sapiens
Biosample type
79
tissue
Organ
928
pancreas
780
liver
672
connective tissue
497
epithelium
487
adipose tissue
357
heart
272
kidney
239
brain
217
vasculature
213
blood vessel
159
bone element
135
artery
79
limb
69
blood
69
bodily fluid
56
eye
55
musculature of body
40
nerve
37
embryo
24
spleen
20
lung
18
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
79
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
79
AMP-T2D consortium
assay_slims!
3D chromatin structure
assay_title!
DNase-seq
month_released!
February, 2020
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve
35
1
4
tibial artery
23
1
muscle of leg
7
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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