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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
34
ChIP-seq
10
ATAC-seq
DNase-seq
Assay category
54
Transcription
34
DNA binding
10
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
24
October, 2019
5
May, 2019
3
July, 2019
Available data
98
bam
81
bigWig
70
bed narrowPeak
58
tsv
21
bigBed narrowPeak
6
tagAlign
Organism
98
Homo sapiens
Biosample type
66
cell line
30
tissue
2
primary cell
Organ
681
pancreas
676
liver
584
connective tissue
440
adipose tissue
300
epithelium
211
brain
181
heart
174
vasculature
171
blood vessel
98
artery
78
limb
66
bone element
65
kidney
60
blood
60
bodily fluid
40
nerve
36
embryo
24
musculature of body
23
spleen
18
vein
8
skeleton
3
eye
1
pericardium
1
pituitary gland
Project
98
AMP
Genome assembly (visualization)
89
GRCh38
89
hg19
Lab
98
AMP-T2D consortium
assay_slims!
3D chromatin structure
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
98 results
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total RNA-seq
ChIP-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
tibial artery
23
1
coronary artery
5
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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