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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
Assay category
72
DNA binding
Target of assay
42
transcription factor
30
histone
30
histone modification
15
broad histone mark
15
narrow histone mark
control
4
RNA binding protein
3
chromatin remodeller
Date released
574
February, 2021
313
May, 2021
273
August, 2017
265
November, 2017
260
May, 2020
212
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
84
July, 2019
72
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
58
August, 2021
57
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
31
February, 2018
30
December, 2018
26
January, 2019
22
March, 2020
13
October, 2017
6
November, 2020
5
December, 2019
5
September, 2017
3
August, 2018
3
January, 2018
3
June, 2018
2
March, 2019
1
May, 2023
Available data
72
bam
72
bed narrowPeak
72
bigWig
72
fastq
50
bigBed narrowPeak
10
bed bed3+
Organism
72
Homo sapiens
Biosample type
36
tissue
34
in vitro differentiated cells
2
stem cell
Organ
50
liver
16
epithelium
8
embryo
Project
72
AMP
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
72
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
11
inconsistent control read length
assay_slims!
3D chromatin structure
target.investigated_as!
control
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
tissue
liver
29
right lobe of liver
7
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
6
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
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stem cell
hESC
2
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