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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
3
DNase-seq
1
RRBS
Assay category
82
DNA binding
3
DNA accessibility
1
DNA methylation
Target of assay
49
histone
49
histone modification
26
broad histone mark
24
transcription factor
22
narrow histone mark
9
control
6
RNA binding protein
3
chromatin remodeller
Date released
335
May, 2021
324
November, 2017
148
May, 2020
138
February, 2021
87
August, 2021
86
August, 2017
72
February, 2023
62
November, 2018
55
June, 2019
54
May, 2022
54
October, 2019
46
December, 2017
40
September, 2020
39
February, 2018
27
December, 2018
27
July, 2019
23
January, 2019
16
March, 2020
11
July, 2018
10
April, 2018
8
January, 2021
7
December, 2019
6
January, 2018
6
November, 2020
5
May, 2019
5
November, 2019
4
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
71
bam
71
fastq
65
bigWig
59
bed narrowPeak
26
tagAlign
17
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
86
Homo sapiens
Biosample type
tissue
68
in vitro differentiated cells
18
primary cell
Organ
68
connective tissue
pancreas
29
epithelium
Project
86
AMP
Genome assembly (visualization)
67
hg19
62
GRCh38
Lab
86
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
7
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
assay_slims!
3D chromatin structure
biosample_type!
tissue
organ_slims!
pancreas
BIOSAMPLE
ASSAY
86 results
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ChIP-seq
DNase-seq
RRBS
in vitro differentiated cells
adipocyte
67
1
primary cell
skeletal muscle myoblast
15
2
1
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