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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
Assay category
38
DNA binding
Target of assay
75
histone
75
histone modification
38
narrow histone mark
36
broad histone mark
24
transcription factor
21
control
6
RNA binding protein
3
chromatin remodeller
Date released
64
May, 2021
38
August, 2017
15
September, 2018
14
December, 2017
12
October, 2019
11
August, 2021
11
June, 2019
10
November, 2017
8
February, 2018
4
November, 2019
1
January, 2019
1
March, 2020
1
May, 2019
Available data
34
bam
34
bigWig
34
fastq
26
bed narrowPeak
9
tagAlign
6
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
38
Homo sapiens
Biosample type
tissue
22
primary cell
16
in vitro differentiated cells
Organ
16
connective tissue
16
pancreas
8
epithelium
Project
38
AMP
Genome assembly (visualization)
34
GRCh38
34
hg19
Lab
38
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
assay_slims!
3D chromatin structure
biosample_type!
tissue
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
primary cell
pancreatic endocrine cell
8
skeletal muscle myoblast
6
pancreatic alpha cell
4
pancreatic beta cell
4
in vitro differentiated cells
adipocyte
16
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