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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
6
single cell RNA-seq
3
total RNA-seq
1
pCHi-C
Assay category
35
DNA accessibility
9
Transcription
3D chromatin structure
Date released
35
February, 2023
6
August, 2021
3
February, 2020
1
March, 2020
Available data
bam
72
bigWig
68
tsv
56
bed narrowPeak
10
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
45
Homo sapiens
Biosample type
45
tissue
Organ
228
pancreas
209
kidney
199
epithelium
138
heart
93
bone element
64
liver
52
eye
46
vasculature
45
blood vessel
39
artery
39
connective tissue
20
lung
18
brain
13
adipose tissue
11
musculature of body
9
blood
9
bodily fluid
8
skeleton
3
limb
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
45
AMP
Genome assembly (visualization)
35
GRCh38
Lab
45
AMP-T2D consortium
assay_slims!
3D chromatin structure
files.file_type!
bam
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
45 results
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ATAC-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
coronary artery
35
1
aorta
4
1
pulmonary artery
2
ascending aorta
1
tibial artery
1
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