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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
2
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
62
DNA binding
4
DNA accessibility
Target of assay
57
histone modification
56
histone
32
broad histone mark
24
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
163
June, 2019
151
October, 2019
93
May, 2019
66
August, 2017
65
April, 2019
64
August, 2021
63
February, 2023
58
November, 2017
45
October, 2018
40
May, 2024
38
May, 2022
36
December, 2017
27
May, 2020
20
November, 2019
17
November, 2018
12
October, 2017
8
February, 2021
7
July, 2019
6
January, 2019
3
December, 2018
2
March, 2020
Available data
178
bigWig
175
fastq
170
bam
89
tsv
66
bed narrowPeak
59
tagAlign
26
bed bed3+
26
bed broadPeak
22
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
60
Homo sapiens
Biosample type
66
tissue
43
in vitro differentiated cells
33
primary cell
Organ
32
pancreas
18
liver
13
musculature of body
3
adipose tissue
3
connective tissue
Project
66
AMP
Genome assembly (visualization)
66
hg19
45
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
18
1
1
liver
17
skeletal muscle tissue
13
pancreas
12
adipose tissue
1
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