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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
18
ATAC-seq
Assay category
26
DNA binding
18
DNA accessibility
Target of assay
19
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
3
narrow histone mark
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
602
bam
577
bigWig
564
tsv
89
txt
75
fastq
44
bed narrowPeak
21
bigBed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
44
Homo sapiens
Biosample type
29
cell line
14
tissue
1
primary cell
Organ
15
blood
15
bodily fluid
12
artery
12
blood vessel
12
heart
12
vasculature
8
bone element
8
skeleton
6
limb
6
spleen
1
connective tissue
1
liver
Project
44
AMP
Genome assembly (visualization)
44
GRCh38
44
hg19
Lab
44
AMP-T2D consortium
Audit category:
1
inconsistent replicate
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
44 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
GM12878
15
smooth muscle cell of the coronary artery
4
8
HepG2
1
iPSC derived cell line
1
tissue
spleen
6
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
+ See 4 more…
primary cell
osteoblast
1
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