Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
66
DNA binding
10
DNA accessibility
Target of assay
63
transcription factor
21
RNA binding protein
15
recombinant protein
7
chromatin remodeller
3
histone
3
histone modification
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
103
bam
100
bigWig
88
fastq
76
bed narrowPeak
73
bigBed narrowPeak
45
tsv
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
2
bedpe bed3+
2
ibed
1
csv
Organism
76
Homo sapiens
Biosample type
57
cell line
19
tissue
Organ
51
liver
12
blood
12
bodily fluid
6
pancreas
4
spleen
2
brain
1
adipose tissue
1
connective tissue
1
epithelium
Project
73
AMP
3
T1D
Genome assembly (visualization)
75
GRCh38
74
hg19
Lab
76
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
76 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
cell line
HepG2
44
GM12878
12
EndoC_BH1
1
tissue
liver
4
2
spleen
3
1
body of pancreas
2
brain
2
islet of Langerhans
2
+ See 3 more…
See all biosamples
Download