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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
Assay category
64
DNA binding
Target of assay
350
transcription factor
89
recombinant protein
79
control
64
RNA binding protein
35
histone
35
histone modification
30
chromatin remodeller
18
broad histone mark
17
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
34
November, 2017
21
November, 2018
6
January, 2019
2
December, 2018
August, 2021
1
November, 2019
Available data
64
bam
63
fastq
62
bed narrowPeak
62
bigWig
61
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
1
tar
Organism
64
Homo sapiens
Biosample type
64
cell line
28
tissue
11
in vitro differentiated cells
10
primary cell
Organ
53
liver
10
blood
10
bodily fluid
1
epithelium
1
pancreas
Project
64
AMP
Genome assembly (visualization)
61
hg19
58
GRCh38
Lab
64
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
assay_slims!
3D chromatin structure
month_released!
August, 2021
BIOSAMPLE
ASSAY
64 results
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ChIP-seq
cell line
HepG2
53
GM12878
10
EndoC_BH1
1
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