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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
35
ATAC-seq
18
ChIP-seq
3
pCHi-C
3
total RNA-seq
2
RRBS
2
WGBS
Assay category
96
Transcription
35
DNA accessibility
18
DNA binding
4
DNA methylation
3D chromatin structure
Target of assay
18
control
Date released
92
August, 2021
36
February, 2023
10
April, 2019
February, 2021
6
May, 2019
4
July, 2019
3
February, 2020
3
March, 2020
2
June, 2019
Available data
179
bed narrowPeak
bigWig
145
bam
116
tsv
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
Organism
156
Homo sapiens
Biosample type
153
tissue
3
primary cell
Organ
309
pancreas
214
kidney
211
epithelium
163
liver
156
heart
109
connective tissue
68
vasculature
67
blood vessel
66
adipose tissue
64
brain
55
eye
46
artery
22
musculature of body
21
limb
20
lung
14
blood
14
bodily fluid
12
nerve
9
bone element
9
spleen
8
embryo
8
skeleton
5
gonad
5
ovary
5
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
156
AMP
Genome assembly (visualization)
35
GRCh38
2
hg19
Lab
156
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
3D chromatin structure
month_released!
February, 2021
files.file_type!
bigWig
BIOSAMPLE
ASSAY
156 results
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single cell RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
total RNA-seq
RRBS
WGBS
tissue
coronary artery
35
2
1
heart left ventricle
18
6
1
1
2
heart right ventricle
17
2
1
right cardiac atrium
18
1
1
left cardiac atrium
18
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primary cell
cardiac fibroblast
2
1
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