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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
pCHi-C
Assay category
3D chromatin structure
Date released
2
March, 2020
1
August, 2018
Available data
3174
bam
2914
bigWig
1600
tsv
1567
bed narrowPeak
1357
fastq
832
bigBed narrowPeak
398
tagAlign
161
txt
153
zippedFastqFolder
135
bed broadPeak
98
bigBed broadPeak
81
bed bed3+
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
4
tar
3
bedpe bed3+
2
ibed
1
tagAlign bed3+
1
vcf
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Organ
1
adipose tissue
1
connective tissue
Project
3
AMP
Genome assembly (visualization)
2
hg19
Lab
3
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
3D chromatin structure
month_released!
June, 2019
BIOSAMPLE
ASSAY
3 results
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pCHi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
white fat cell
1
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