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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
342
ChIP-seq
Assay category
342
DNA binding
Target of assay
264
transcription factor
73
histone
73
histone modification
66
recombinant protein
45
broad histone mark
37
RNA binding protein
28
narrow histone mark
17
chromatin remodeller
2
other context
2
other post-translational modification
Date released
312
November, 2017
210
June, 2019
97
May, 2019
73
November, 2018
70
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
426
bam
364
bigWig
358
fastq
343
bed narrowPeak
342
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
342
Homo sapiens
Biosample type
276
cell line
60
tissue
6
primary cell
Organ
249
liver
63
brain
27
blood
27
bodily fluid
4
epithelium
4
vasculature
3
spleen
2
blood vessel
Project
342
AMP
Genome assembly (visualization)
310
GRCh38
288
hg19
Lab
342
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
10
missing controlled_by
Audit category:
19
inconsistent control read length
4
inconsistent control run_type
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
342 results
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Clear Filters
ChIP-seq
cell line
HepG2
249
GM12878
27
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 2 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
See all biosamples
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