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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
6
single cell RNA-seq
3
total RNA-seq
1
pCHi-C
Assay category
35
DNA accessibility
9
Transcription
3D chromatin structure
Date released
35
February, 2023
6
August, 2021
3
February, 2020
1
March, 2020
Available data
bam
148
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
9
bed bed3+
6
tagAlign
3
fastq
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
45
Homo sapiens
Biosample type
45
tissue
Organ
248
pancreas
209
kidney
199
epithelium
139
heart
106
liver
93
bone element
90
connective tissue
54
eye
49
adipose tissue
46
vasculature
45
blood vessel
40
brain
39
artery
33
musculature of body
20
lung
9
blood
9
bodily fluid
8
skeleton
5
gonad
5
ovary
4
limb
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
45
AMP
Genome assembly (visualization)
35
GRCh38
Lab
45
AMP-T2D consortium
assay_slims!
3D chromatin structure
files.file_type!
bam
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ATAC-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
coronary artery
35
1
aorta
4
1
pulmonary artery
2
ascending aorta
1
tibial artery
1
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