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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
Assay category
77
DNA binding
Target of assay
155
histone
155
histone modification
78
broad histone mark
77
narrow histone mark
53
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
34
August, 2017
15
September, 2018
11
October, 2018
7
October, 2019
4
November, 2019
3
March, 2020
2
May, 2021
1
May, 2019
Available data
69
bigWig
67
bam
59
bed narrowPeak
48
fastq
19
bigBed narrowPeak
7
tagAlign
6
bed bed3+
4
bed broadPeak
Organism
75
Homo sapiens
Biosample type
36
tissue
31
primary cell
9
cell line
1
in vitro differentiated cells
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
73
AMP
4
T1D
Genome assembly (visualization)
69
hg19
67
GRCh38
Lab
77
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
26
missing controlled_by
Audit category:
6
inconsistent control read length
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
20
body of pancreas
6
endocrine pancreas
6
pancreas
4
primary cell
pancreatic endocrine cell
12
pancreatic ductal cell
7
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
cell line
EndoC_BH1
6
Panc1
3
in vitro differentiated cells
pancreatic PP cell
1
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