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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
4
total RNA-seq
2
small RNA-seq
1
WGBS
Assay category
DNA accessibility
13
DNA binding
6
Transcription
1
DNA methylation
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
Date released
8
June, 2019
5
July, 2019
5
May, 2019
2
March, 2020
Available data
20
bam
20
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
20
Homo sapiens
Biosample type
10
primary cell
10
tissue
Organ
568
pancreas
552
connective tissue
523
liver
419
adipose tissue
243
epithelium
183
brain
149
heart
134
vasculature
132
blood vessel
79
artery
58
bone element
54
blood
54
bodily fluid
52
limb
51
kidney
29
embryo
28
nerve
20
musculature of body
14
spleen
10
vein
2
eye
1
pericardium
1
pituitary gland
Project
20
AMP
Genome assembly (visualization)
38
hg19
20
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
total RNA-seq
small RNA-seq
WGBS
primary cell
skeletal muscle satellite cell
7
1
1
skeletal muscle cell
1
tissue
muscle of leg
5
1
psoas muscle
2
skeletal muscle tissue
1
1
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