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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
total RNA-seq
13
ChIP-seq
2
small RNA-seq
1
WGBS
Assay category
64
Transcription
DNA accessibility
13
DNA binding
1
DNA methylation
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
Date released
58
February, 2021
8
June, 2019
5
July, 2019
5
May, 2019
2
March, 2020
Available data
78
bam
78
bigWig
64
tsv
13
bed narrowPeak
13
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
78
Homo sapiens
Biosample type
68
tissue
10
primary cell
Organ
568
pancreas
552
connective tissue
523
liver
419
adipose tissue
243
epithelium
189
heart
183
brain
134
vasculature
132
blood vessel
79
artery
58
bone element
54
blood
54
bodily fluid
52
limb
51
kidney
29
embryo
28
nerve
20
musculature of body
14
spleen
10
vein
2
eye
1
pericardium
1
pituitary gland
Project
78
AMP
Genome assembly (visualization)
96
hg19
78
GRCh38
Lab
78
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
78 results
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total RNA-seq
ChIP-seq
small RNA-seq
WGBS
tissue
bone tissue
58
muscle of leg
5
1
psoas muscle
2
skeletal muscle tissue
1
1
primary cell
skeletal muscle satellite cell
1
7
1
skeletal muscle cell
1
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