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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
single cell RNA-seq
47
WGBS
16
total RNA-seq
3
Hi-C
Assay category
101
Transcription
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
February, 2023
74
May, 2022
56
September, 2020
18
February, 2021
3
October, 2022
Available data
93
zippedFastqFolder
56
fastq
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
151
Homo sapiens
Biosample type
151
primary cell
Organ
66
epithelium
66
pancreas
Project
3286
AMP
196
T1D
151
HPAP
47
KPMP
9
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
hg19
Lab
151
Klaus Kaestner, Upenn
Audit category:
3
audit script error
assay_slims!
DNA accessibility
audit.ERROR.category!
inconsistent ontology term
month_released!
February, 2023
BIOSAMPLE
ASSAY
151 results
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single cell RNA-seq
WGBS
total RNA-seq
Hi-C
primary cell
Langerhans cell
85
pancreatic alpha cell
31
15
1
pancreatic beta cell
16
1
1
pancreatic acinar cell
1
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