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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
186
total RNA-seq
130
ChIP-seq
1
pCHi-C
Assay category
186
Transcription
130
DNA binding
DNA accessibility
Target of assay
87
histone
87
histone modification
50
narrow histone mark
37
broad histone mark
37
control
6
transcription factor
4
RNA binding protein
Date released
538
February, 2021
406
November, 2017
400
August, 2017
291
May, 2021
262
October, 2019
237
May, 2020
234
August, 2021
162
July, 2018
117
May, 2019
101
May, 2022
98
February, 2023
98
July, 2019
90
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
45
March, 2020
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
20
November, 2019
15
October, 2017
9
April, 2020
9
June, 2019
8
December, 2019
8
November, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
2
June, 2018
1
March, 2019
Available data
313
bam
276
bigWig
185
tsv
92
bed narrowPeak
64
bigBed narrowPeak
50
tagAlign
Organism
317
Homo sapiens
Biosample type
273
tissue
43
primary cell
1
cell line
Organ
194
liver
57
heart
23
kidney
Project
276
AMP
41
T1D
Genome assembly (visualization)
276
hg19
267
GRCh38
Lab
276
AMP-T2D consortium
41
Kyle Gaulton, UCSD
Audit category:
inconsistent ontology term
assay_slims!
DNA accessibility
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
317 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
tissue
liver
143
50
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
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cell line
HepG2
1
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